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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828753.1_cds_XP_016503500.1_17038
CDS Infomation

[gene=LOC107821581] [db_xref=GeneID:107821581] [protein=leucine-rich repeat receptor protein kinase EMS1-like] [protein_id=XP_016503500.1] [location=complement(join(12843..13327,13822..14676,14852..15112,15719..16172))] [gbkey=CDS]
Sequence

ATGGGTTCTCTCTCTTTTCTCTCCCCCATTTTCTTATTCATCTTAATCCTAGCATACCCA
CAACAAAGAGTTTTTTCTGATCCCATTGTTACTAAAACTCCTTTATCTTTACTAATGAGT
ATTAAAGCTTCTTTGGACCCAAAAAATCTCATTCTTTCATCATGGTCAGCGAATGCTACT
GACCCATGCAATGGTTCTTTTGAAGGTATAGCTTGTAATGAGCTTGGTCAAGTTGTTAAC
ATTTCTTTGCAAGGCAAAGATCTTAGTGGGAAAATACCACCTGAGATTGGTCAGCTTCAG
AGCTTGTCTGGGTTGTACTTGCACTTCAACAAGCTACATGGTGTTGTACCTAAAGAAATT
GCTAACTTAACTCAGCTCTCAGATTTGTATCTCAATGTGAATAATCTCTCTGGTGTTATT
CCTACTGAGGTTGGAAATATGTCTAATCTTCAAGTGTTGCAACTATGCTATAACCAGTTG
ACTGGAAGCATACCCAATCAAATTGGGGCTCTGAAGAAGCTCAGTGTTCTTGCTTTGCAA
GTCAATCAGTTAACTGGAGCAATTCCTGCAAGCTTGGGAGACTTGGAGATGTTAACCAGA
CTTGACTTGAGCTTCAATAATTTCTTCGGGTCGATTCCAGTAAAACTGGCTAATGCTCCT
AAGCTAGAAGTTCTTGATATCAGAAATAATACCCTCTCTGGCAATGTCCCTCTAGCCTTA
AAGAGACTGAATGAAGGATTTCAGTATGCAAACAACCCGGATTTATGTGGAATTGAATTT
TCTTCATTGAAACTTTGCACTGTTTCTGGTCTAAACCAAAATAGACCACAACCATTTCAA
CCTGGTTCAAATCGTCTCCCGACAAAAGACATCCCAGAGTCTGCTAATGTGCAAGCAAAA
CAAATGAGTCAGTCTAGAAAATCACAAACTGCTGTGGTTGTTGGTGTTATTGCACTTTTT
GTTGCAGTAGCAGTAACTGGGCTTTTCACATTTTCATGGTACCGCCGTCGGAAACAGAAA
ATTGGAGGTACTCTTGATTCTTCTGATAGGCGACTGAGTACTGATGAGGTGAAGGAGGTC
TCTAGAAGAAGCGCGTCGCCCCTCATCAGCCTGGAGTATTCCAATGGGTGGGATCCTTTG
GGCAAAGGTCGAGGTGGAAGTGCTTTCTCTCAGGAAGTATTTGAGAGCTTTATGTTCAAT
TTGGATGAAGTTGAGTCTGCTACACTGTATTTTTCAGAGGCAAATTTGTTAGGCAAGAGT
AATTTCACAGCCGTTTATAAAGGGACACTGAGGGATGGGTCTTCTGTTGCTATTAAGTGC
ATTTCGAAGACTAGCTGCAAGTCTGATGAAACTGAATTTCTCAAGGGACTAAAGCTCTTA
ACTTCATTGAAACATGAAAATCTTCTGAGGTTGAGAGGCTTTTGCTGTTCAAAAGGCAGG
GGAGAGTGCTTTCTGATCTATGATTTTGTCCCCAATGGAAATTTGTTGCAGTACCTTGAC
GTGAAGGATGGAAAAGGAAAGGTCCTCGATTGGTCTACCAGACTTCACATAATCAAAGGC
GTTGCCAGAGGTATTCAGTATTTGCATGGAAACAAGGGAAACAAACCTGCTCTAGTCCAT
AGAAATATATCAGCTGAAAAAGTACTCATTGACCAGCGTTACAACCCATTGCTCTCAGAT
TCTGGTCTGCCAAAACTACTTGCAGATGACATTGTCTTCTCAACGCTCAAGGAAAGTGCT
GCAATGGGCTACCTAGCTCCCGAGTATACAACCACCGGCAGGTTCACTGAAAAGAGTGAT
CTCTACGCATTTGGTGTGATTATATTTCAGATTCTCTCCGGAAAGCGCAGAATCACCCAC
TCGAACCATCAAGGGGCAGAGTTGTGCAGATACGAAGACTTCATTGATCCAAAACTTGGG
GGCAATTTTGTAGAAGCTGAGGCAGTCCAGATGGCAAAGGTTGCTTTACTTTGCACTCGA
GAGTCACCAAATCAGAGGCCAAACATTGAAATCGTCATGCAAGAACTGAATGATCTAATC
TCCACCAAGTCGTGA

Peptide Sequence

PEP ID

XP_016503500.1
PEP Infomation

PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Nicotiana tabacum]
Sequence

MGSLSFLSPIFLFILILAYPQQRVFSDPIVTKTPLSLLMSIKASLDPKNLILSSWSANAT
DPCNGSFEGIACNELGQVVNISLQGKDLSGKIPPEIGQLQSLSGLYLHFNKLHGVVPKEI
ANLTQLSDLYLNVNNLSGVIPTEVGNMSNLQVLQLCYNQLTGSIPNQIGALKKLSVLALQ
VNQLTGAIPASLGDLEMLTRLDLSFNNFFGSIPVKLANAPKLEVLDIRNNTLSGNVPLAL
KRLNEGFQYANNPDLCGIEFSSLKLCTVSGLNQNRPQPFQPGSNRLPTKDIPESANVQAK
QMSQSRKSQTAVVVGVIALFVAVAVTGLFTFSWYRRRKQKIGGTLDSSDRRLSTDEVKEV
SRRSASPLISLEYSNGWDPLGKGRGGSAFSQEVFESFMFNLDEVESATLYFSEANLLGKS
NFTAVYKGTLRDGSSVAIKCISKTSCKSDETEFLKGLKLLTSLKHENLLRLRGFCCSKGR
GECFLIYDFVPNGNLLQYLDVKDGKGKVLDWSTRLHIIKGVARGIQYLHGNKGNKPALVH
RNISAEKVLIDQRYNPLLSDSGLPKLLADDIVFSTLKESAAMGYLAPEYTTTGRFTEKSD
LYAFGVIIFQILSGKRRITHSNHQGAELCRYEDFIDPKLGGNFVEAEAVQMAKVALLCTR
ESPNQRPNIEIVMQELNDLISTKS

Transcript Sequence

Gene sequence data has not been registered.